Categories: "Encode" or "Job Notes"

ENCODE publication interview

October 1st, 2012
Following on from the publication of the main papers of the ENCODE (Encyclopedia Of DNA Elements) scale-up phase, here are a few key points about the project and the results. more »

Encode pilot regions

July 28th, 2011
This is the list of genomic regions that was analysed as the 1% of the human genome in the ENCODE pilot phase. The main phase of ENCODE is looking at the entire human genome. Region name Chr. start end Description ENr324 X 122609996 12… more »

AnnoTrack: Rails System

January 31st, 2011
This document is part of the administrator documentation for the AnnoTrack software for genome annotation tracking. To understand the code underlying specific web pages it is helpful to check the routing entries in config/routes.rb and vendor/plugi… more »

AnnoTrack: General Documentation

January 31st, 2011
Setting up a new system & adjusting it to your needs The system is flexible enough to be of use for other groups and projects performing genome annotation in a collaborative effort and is therefor provided here. These are notes on how to start a… more »

AnnoTrack: Web-Server

January 27th, 2011
AnnoTrack is a Ruby-On-Rails application with is executed by an Apache2 server with the mod-rails (Passenger) plugin. It is living on virtual machines (VM) where we don't run any other services as rails does not play nice with other web-services. The… more »